BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031C11SP1|AL429372
(956 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1496 1729 0.0
>3x_Contig1496
Length = 9544
Score = 1729 bits (862), Expect = 0.0
Identities = 922/953 (96%)
Strand = Plus / Minus
Query: 1 gtctttttttttgacttgacatgtttgatgcctcatctagcttccaacattaaaaattag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5813 gtctttttttttgacttgacatgtttgatgcctcatctagcttccaacattaaaaattag 5754
Query: 61 atattacatcagagttgtcttctaatttcaatttgatgcgaagagatgatcattaagata 120
|||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| |
Sbjct: 5753 atattacatcagagttgtcttctaatttcaatttgatgcgaagagatgatcagtgagaga 5694
Query: 121 catacatatatatatatatvtacbbbcvatccatattggaagaagagaaagccttgtaat 180
|| | | | | |||||| ||| | ||||||||||||||||||||||||||||||||
Sbjct: 5693 cagagggagagagatatatatactttcaatccatattggaagaagagaaagccttgtaat 5634
Query: 181 ctcatcatatcttgccccataatttaaggagtgagtctgactgtytccgcttctctggta 240
|||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 5633 ctcatcatatcttgccccataatttaaggagttagtctgactgtttccgcttctctggta 5574
Query: 241 gacagaccattaaacagaatattccgttgtcagaattgataacccnananaatamcatca 300
||||||||||||||||||||||||||||||||||||||||||||| | | |||| |||||
Sbjct: 5573 gacagaccattaaacagaatattccgttgtcagaattgataaccctatataataacatca 5514
Query: 301 cgttcmccsscbycactaagacaacatggatcaaagaactgtcggtattttaggcggkgg 360
||||| || | |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 5513 cgttcaccttcttcactaagacaacatggatcaaagaactgtcggtattttaggcggtgg 5454
Query: 361 ccaattgggccgtatgattgttgaagctgcycatagactgaatgtgaaaactatcatttt 420
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 5453 ccaattgggccgtatgattgttgaagctgctcatagactgaatgtgaaaactatcatttt 5394
Query: 421 ggatgcagaaaactctccggcaaagcagattaatgctttgagcgaacatgtcaatggttc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5393 ggatgcagaaaactctccggcaaagcagattaatgctttgagcgaacatgtcaatggttc 5334
Query: 481 ctttgccaaaccggaagatatcaagaaaattgcmtctctttgtgatgtcttaactgttga 540
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 5333 ctttgccaaaccggaagatatcaagaaaattgcatctctttgtgatgtcttaactgttga 5274
Query: 541 matcgaacacgtcgatgttccaactttgaaaagggttcaacaggatcaccctaacttgaa 600
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5273 aatcgaacacgtcgatgttccaactttgaaaagggttcaacaggatcaccctaacttgaa 5214
Query: 601 gatctatcccgacccagagacgatcgctttgattcaagataaatttgttcaaaagcaata 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5213 gatctatcccgacccagagacgatcgctttgattcaagataaatttgttcaaaagcaata 5154
Query: 661 tttgattcagaataagatcagtgtggcaaagtccgttgctgttaacagcgatgaagaatc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5153 tttgattcagaataagatcagtgtggcaaagtccgttgctgttaacagcgatgaagaatc 5094
Query: 721 gttggctaaagttggttttgaatttggttacccattcatgcttaaatcaagaactttagc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5093 gttggctaaagttggttttgaatttggttacccattcatgcttaaatcaagaactttagc 5034
Query: 781 ctacgatggcagagggaactttgtcgtgaaatccaaggagtctctttccgaagcacttga 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5033 ctacgatggcagagggaactttgtcgtgaaatccaaggagtctctttccgaagcacttga 4974
Query: 841 ggtattgaaagatcgtcccttgtatgccgagaaatgggctccattcgtcaaagagttggc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4973 ggtattgaaagatcgtcccttgtatgccgagaaatgggctccattcgtcaaagagttggc 4914
Query: 901 tgtaatggtcgtgagatctccagaaggtaaagtgktttcttacactactgttg 953
|||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 4913 tgtaatggtcgtgagatctccagaaggtaaagtgttttcttacactactgttg 4861
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,858
Number of Sequences: 1807
Number of extensions: 10858
Number of successful extensions: 879
Number of sequences better than 1.0e-20: 1
length of query: 956
length of database: 10,358,551
effective HSP length: 16
effective length of query: 940
effective length of database: 10,329,639
effective search space: 9709860660
effective search space used: 9709860660
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (100.8 bits)